Supplementary
data for Uhlitz, Bischoff et al. 2020
scRNA-seq raw counts
- Raw count data for patient samples as loom file:
sccrc_rawcounts.loom
- Processed count matrices for SLAM-seq experiment of organoids in
MatrixMarket format:
count_matrices_slamseq.tgz (as tar, count matrices for old and
new transcripts)
Conditions: E=only EGF, W=EGF+WNT
Samples were pooled, and demultiplexed using SNPs according to these
tables:
demux.tar.gz
- Total-Seq of patient p026, tumor sample (Raw count matrix in
Matrix Market format:
p026_total_seq.tar
Somatic mutations obtained by exome sequencing
QC reports